Index

A

absolute() (in module pyclesperanto_prototype), [1] absolute_difference() (in module pyclesperanto_prototype), [1] add_image_and_scalar() (in module pyclesperanto_prototype), [1] add_images() (in module pyclesperanto_prototype), [1] add_images_weighted() (in module pyclesperanto_prototype), [1] affine_transform() (in module pyclesperanto_prototype), [1] AffineTransform3D (class in pyclesperanto_prototype), [1] apply_vector_field() (in module pyclesperanto_prototype), [1] arg_maximum_z_projection() (in module pyclesperanto_prototype), [1] arg_minimum_z_projection() (in module pyclesperanto_prototype), [1] array_equal() (in module pyclesperanto_prototype), [1] array_equiv() (in module pyclesperanto_prototype), [1] artificial_objects_2d() (in module pyclesperanto_prototype), [1]

artificial_tissue_2d() (in module pyclesperanto_prototype), [1] asarray() (in module pyclesperanto_prototype), [1] available_device_names() (in module pyclesperanto_prototype), [1] average_distance_of_n_closest_neighbors_map() (in module pyclesperanto_prototype), [1] average_distance_of_n_closest_points() (in module pyclesperanto_prototype), [1] average_distance_of_n_far_off_distances() (in module pyclesperanto_prototype), [1] average_distance_of_n_far_off_points() (in module pyclesperanto_prototype), [1] average_distance_of_n_nearest_distances() (in module pyclesperanto_prototype), [1] average_distance_of_n_nearest_neighbors_map() (in module pyclesperanto_prototype), [1] average_distance_of_n_shortest_distances() (in module pyclesperanto_prototype), [1] average_distance_of_touching_neighbors() (in module pyclesperanto_prototype), [1] average_distance_to_n_nearest_other_labels_map() (in module pyclesperanto_prototype), [1] average_neighbor_distance_map() (in module pyclesperanto_prototype), [1]

B

Backend (class in pyclesperanto_prototype) binary_and() (in module pyclesperanto_prototype), [1] binary_edge_detection() (in module pyclesperanto_prototype), [1] binary_intersection() (in module pyclesperanto_prototype), [1] binary_not() (in module pyclesperanto_prototype), [1] binary_or() (in module pyclesperanto_prototype), [1] binary_subtract() (in module pyclesperanto_prototype), [1] binary_union() (in module pyclesperanto_prototype), [1] binary_xor() (in module pyclesperanto_prototype), [1] block_enumerate() (in module pyclesperanto_prototype), [1] bottom_hat_box() (in module pyclesperanto_prototype), [1]

bottom_hat_sphere() (in module pyclesperanto_prototype), [1] bounding_box() (in module pyclesperanto_prototype), [1] BOUNDING_BOX_DEPTH (pyclesperanto_prototype.STATISTICS_ENTRY attribute) BOUNDING_BOX_END_X (pyclesperanto_prototype.STATISTICS_ENTRY attribute) BOUNDING_BOX_END_Y (pyclesperanto_prototype.STATISTICS_ENTRY attribute) BOUNDING_BOX_END_Z (pyclesperanto_prototype.STATISTICS_ENTRY attribute) BOUNDING_BOX_HEIGHT (pyclesperanto_prototype.STATISTICS_ENTRY attribute) BOUNDING_BOX_WIDTH (pyclesperanto_prototype.STATISTICS_ENTRY attribute) BOUNDING_BOX_X (pyclesperanto_prototype.STATISTICS_ENTRY attribute) BOUNDING_BOX_Y (pyclesperanto_prototype.STATISTICS_ENTRY attribute) BOUNDING_BOX_Z (pyclesperanto_prototype.STATISTICS_ENTRY attribute)

C

categories() (in module pyclesperanto_prototype) cbrt() (in module pyclesperanto_prototype), [1] center() (pyclesperanto_prototype.AffineTransform3D method), [1] center_of_mass() (in module pyclesperanto_prototype), [1] CENTROID_X (pyclesperanto_prototype.STATISTICS_ENTRY attribute) CENTROID_Y (pyclesperanto_prototype.STATISTICS_ENTRY attribute) CENTROID_Z (pyclesperanto_prototype.STATISTICS_ENTRY attribute) centroids_of_background_and_labels() (in module pyclesperanto_prototype), [1] centroids_of_labels() (in module pyclesperanto_prototype), [1] cl_info() (in module pyclesperanto_prototype) clip() (in module pyclesperanto_prototype), [1] close_index_gaps_in_label_map() (in module pyclesperanto_prototype), [1] closing_box() (in module pyclesperanto_prototype), [1] closing_labels() (in module pyclesperanto_prototype), [1] closing_sphere() (in module pyclesperanto_prototype), [1] combine_horizontally() (in module pyclesperanto_prototype), [1] combine_labels() (in module pyclesperanto_prototype), [1] combine_vertically() (in module pyclesperanto_prototype), [1] concatenate() (pyclesperanto_prototype.AffineTransform3D method), [1] concatenate_stacks() (in module pyclesperanto_prototype), [1] connected_components_labeling_box() (in module pyclesperanto_prototype), [1] connected_components_labeling_diamond() (in module pyclesperanto_prototype), [1] convolve() (in module pyclesperanto_prototype), [1] copy() (in module pyclesperanto_prototype), [1] (pyclesperanto_prototype.AffineTransform3D method), [1] copy_horizontal_slice() (in module pyclesperanto_prototype), [1]

copy_slice() (in module pyclesperanto_prototype), [1] copy_vertical_slice() (in module pyclesperanto_prototype), [1] count_touching_neighbors() (in module pyclesperanto_prototype), [1] create() (in module pyclesperanto_prototype), [1] create_2d_xy() (in module pyclesperanto_prototype) create_2d_xz() (in module pyclesperanto_prototype) create_2d_yx() (in module pyclesperanto_prototype) create_2d_yz() (in module pyclesperanto_prototype) create_2d_zx() (in module pyclesperanto_prototype) create_2d_zy() (in module pyclesperanto_prototype) create_binary_like() (in module pyclesperanto_prototype) create_from_pointlist() (in module pyclesperanto_prototype) create_image() (in module pyclesperanto_prototype) create_labels_like() (in module pyclesperanto_prototype) create_like() (in module pyclesperanto_prototype) create_matrix_from_pointlists() (in module pyclesperanto_prototype) create_none() (in module pyclesperanto_prototype) create_pointlist_from_labelmap() (in module pyclesperanto_prototype) create_square_matrix_from_labelmap() (in module pyclesperanto_prototype) create_square_matrix_from_pointlist() (in module pyclesperanto_prototype) create_square_matrix_from_two_labelmaps() (in module pyclesperanto_prototype) create_vector_from_labelmap() (in module pyclesperanto_prototype) create_vector_from_square_matrix() (in module pyclesperanto_prototype) create_zyx() (in module pyclesperanto_prototype) crop() (in module pyclesperanto_prototype), [1] crop_border() (in module pyclesperanto_prototype), [1] cubic_root() (in module pyclesperanto_prototype), [1]

D

degrees_to_radians() (in module pyclesperanto_prototype), [1] deskew_x() (in module pyclesperanto_prototype), [1] deskew_y() (in module pyclesperanto_prototype), [1] detect_label_edges() (in module pyclesperanto_prototype), [1] detect_maxima_box() (in module pyclesperanto_prototype), [1] detect_minima_box() (in module pyclesperanto_prototype), [1] difference_of_gaussian() (in module pyclesperanto_prototype), [1] dilate_box() (in module pyclesperanto_prototype), [1] dilate_box_slice_by_slice() (in module pyclesperanto_prototype), [1] dilate_labels() (in module pyclesperanto_prototype), [1] dilate_sphere() (in module pyclesperanto_prototype), [1] dilate_sphere_slice_by_slice() (in module pyclesperanto_prototype), [1] distance_matrix_to_mesh() (in module pyclesperanto_prototype), [1] divide_by_gaussian_background() (in module pyclesperanto_prototype), [1] divide_images() (in module pyclesperanto_prototype), [1]

divide_scalar_by_image() (in module pyclesperanto_prototype), [1] downsample_slice_by_slice_half_median() (in module pyclesperanto_prototype), [1] downsample_xy_by_half_median() (in module pyclesperanto_prototype), [1] draw_angle_mesh_between_touching_labels() (in module pyclesperanto_prototype), [1] draw_box() (in module pyclesperanto_prototype), [1] draw_distance_mesh_between_proximal_labels() (in module pyclesperanto_prototype), [1] draw_distance_mesh_between_touching_labels() (in module pyclesperanto_prototype), [1] draw_line() (in module pyclesperanto_prototype), [1] draw_mesh_between_labels_with_touch_portion_in_range() (in module pyclesperanto_prototype), [1] draw_mesh_between_n_closest_labels() (in module pyclesperanto_prototype), [1] draw_mesh_between_n_most_touching_labels() (in module pyclesperanto_prototype), [1] draw_mesh_between_proximal_labels() (in module pyclesperanto_prototype), [1] draw_mesh_between_touching_labels() (in module pyclesperanto_prototype), [1] draw_sphere() (in module pyclesperanto_prototype), [1] draw_touch_portion_mesh_between_touching_labels() (in module pyclesperanto_prototype), [1] draw_touch_portion_ratio_mesh_between_touching_labels() (in module pyclesperanto_prototype), [1]

E

empty_image() (in module pyclesperanto_prototype) empty_image_like() (in module pyclesperanto_prototype) equal() (in module pyclesperanto_prototype), [1] equal_constant() (in module pyclesperanto_prototype), [1] erode_box() (in module pyclesperanto_prototype), [1] erode_box_slice_by_slice() (in module pyclesperanto_prototype), [1] erode_connected_labels() (in module pyclesperanto_prototype), [1] erode_labels() (in module pyclesperanto_prototype), [1] erode_sphere() (in module pyclesperanto_prototype), [1] erode_sphere_slice_by_slice() (in module pyclesperanto_prototype), [1] eroded_otsu_labeling() (in module pyclesperanto_prototype), [1] euclidean_distance_from_label_centroid_map() (in module pyclesperanto_prototype), [1] exclude_labels() (in module pyclesperanto_prototype), [1] exclude_labels_on_edges() (in module pyclesperanto_prototype), [1] exclude_labels_out_of_size_range() (in module pyclesperanto_prototype), [1] exclude_labels_outside_size_range() (in module pyclesperanto_prototype), [1] exclude_labels_with_average_values_out_of_range() (in module pyclesperanto_prototype), [1] exclude_labels_with_average_values_within_range() (in module pyclesperanto_prototype), [1]

exclude_labels_with_map_values_equal_to_constant() (in module pyclesperanto_prototype), [1] exclude_labels_with_map_values_not_equal_to_constant() (in module pyclesperanto_prototype), [1] exclude_labels_with_map_values_out_of_range() (in module pyclesperanto_prototype), [1] exclude_labels_with_map_values_within_range() (in module pyclesperanto_prototype), [1] exclude_labels_with_values_equal_to_constant() (in module pyclesperanto_prototype), [1] exclude_labels_with_values_not_equal_to_constant() (in module pyclesperanto_prototype), [1] exclude_labels_with_values_out_of_range() (in module pyclesperanto_prototype), [1] exclude_labels_with_values_within_range() (in module pyclesperanto_prototype), [1] exclude_large_labels() (in module pyclesperanto_prototype), [1] exclude_small_labels() (in module pyclesperanto_prototype), [1] execute() (in module pyclesperanto_prototype) execute_separable_kernel() (in module pyclesperanto_prototype) exp() (in module pyclesperanto_prototype), [1] exponential() (in module pyclesperanto_prototype), [1] extend_labeling_via_voronoi() (in module pyclesperanto_prototype), [1] extend_labels_with_maximum_radius() (in module pyclesperanto_prototype), [1] extended_depth_of_focus_variance_projection() (in module pyclesperanto_prototype), [1] extension_ratio_map() (in module pyclesperanto_prototype), [1]

F

fabs() (in module pyclesperanto_prototype), [1] fill_zeros_inpainting() (in module pyclesperanto_prototype), [1]

flag_existing_intensities() (in module pyclesperanto_prototype), [1] flag_existing_labels() (in module pyclesperanto_prototype), [1] flip() (in module pyclesperanto_prototype), [1]

G

gamma_correction() (in module pyclesperanto_prototype), [1] gauss_otsu_labeling() (in module pyclesperanto_prototype), [1] gaussian_blur() (in module pyclesperanto_prototype), [1] generate_angle_matrix() (in module pyclesperanto_prototype), [1] generate_binary_overlap_matrix() (in module pyclesperanto_prototype), [1] generate_distal_neighbors_matrix() (in module pyclesperanto_prototype), [1] generate_distance_matrix() (in module pyclesperanto_prototype), [1] generate_n_most_touching_neighbors_matrix() (in module pyclesperanto_prototype), [1] generate_n_nearest_neighbors_matrix() (in module pyclesperanto_prototype), [1] generate_proximal_neighbors_matrix() (in module pyclesperanto_prototype), [1] generate_touch_count_matrix() (in module pyclesperanto_prototype), [1] generate_touch_matrix() (in module pyclesperanto_prototype), [1] generate_touch_mean_intensity_matrix() (in module pyclesperanto_prototype), [1]

generate_touch_mean_intensity_within_range_matrix() (in module pyclesperanto_prototype), [1] generate_touch_portion_matrix() (in module pyclesperanto_prototype), [1] generate_touch_portion_within_range_neighbors_matrix() (in module pyclesperanto_prototype), [1] get() (pyclesperanto_prototype.Backend method) get_device() (in module pyclesperanto_prototype), [1] get_instance() (pyclesperanto_prototype.Backend class method) gradient_x() (in module pyclesperanto_prototype), [1] gradient_y() (in module pyclesperanto_prototype), [1] gradient_z() (in module pyclesperanto_prototype), [1] greater() (in module pyclesperanto_prototype), [1] greater_constant() (in module pyclesperanto_prototype), [1] greater_or_equal() (in module pyclesperanto_prototype), [1] greater_or_equal_constant() (in module pyclesperanto_prototype), [1]

H

hessian_eigenvalues() (in module pyclesperanto_prototype), [1]

histogram() (in module pyclesperanto_prototype), [1]

I

IDENTIFIER (pyclesperanto_prototype.STATISTICS_ENTRY attribute) imread() (in module pyclesperanto_prototype) imshow() (in module pyclesperanto_prototype), [1]

inverse() (pyclesperanto_prototype.AffineTransform3D method), [1] invert() (in module pyclesperanto_prototype), [1] is_matrix_symmetric() (in module pyclesperanto_prototype), [1]

J

jaccard_index() (in module pyclesperanto_prototype), [1]

L

label() (in module pyclesperanto_prototype), [1] label_centroids_to_pointlist() (in module pyclesperanto_prototype), [1] label_maximum_extension_map() (in module pyclesperanto_prototype), [1] label_maximum_extension_ratio_map() (in module pyclesperanto_prototype), [1] label_maximum_intensity_map() (in module pyclesperanto_prototype), [1] label_mean_extension_map() (in module pyclesperanto_prototype), [1] label_mean_intensity_map() (in module pyclesperanto_prototype), [1] label_minimum_intensity_map() (in module pyclesperanto_prototype), [1] label_nonzero_pixel_count_map() (in module pyclesperanto_prototype), [1] label_nonzero_pixel_count_ratio_map() (in module pyclesperanto_prototype), [1] label_overlap_count_map() (in module pyclesperanto_prototype), [1] label_pixel_count_map() (in module pyclesperanto_prototype), [1] label_spots() (in module pyclesperanto_prototype), [1] label_standard_deviation_intensity_map() (in module pyclesperanto_prototype), [1] label_to_mask() (in module pyclesperanto_prototype), [1] labelled_spots_to_pointlist() (in module pyclesperanto_prototype), [1]

laplace_box() (in module pyclesperanto_prototype), [1] laplace_diamond() (in module pyclesperanto_prototype), [1] large_hessian_eigenvalue() (in module pyclesperanto_prototype), [1] local_cross_correlation() (in module pyclesperanto_prototype), [1] local_maximum_touching_neighbor_count_map() (in module pyclesperanto_prototype), [1] local_mean_touching_neighbor_count_map() (in module pyclesperanto_prototype), [1] local_median_touching_neighbor_count_map() (in module pyclesperanto_prototype), [1] local_minimum_touching_neighbor_count_map() (in module pyclesperanto_prototype), [1] local_standard_deviation_touching_neighbor_count_map() (in module pyclesperanto_prototype), [1] local_threshold() (in module pyclesperanto_prototype), [1] log() (in module pyclesperanto_prototype), [1] logarithm() (in module pyclesperanto_prototype), [1] logical_and() (in module pyclesperanto_prototype), [1] logical_not() (in module pyclesperanto_prototype), [1] logical_or() (in module pyclesperanto_prototype), [1] logical_xor() (in module pyclesperanto_prototype), [1]

M

map_array() (in module pyclesperanto_prototype), [1] mask() (in module pyclesperanto_prototype), [1] mask_label() (in module pyclesperanto_prototype), [1] masked_voronoi_labeling() (in module pyclesperanto_prototype), [1] MASS_CENTER_X (pyclesperanto_prototype.STATISTICS_ENTRY attribute) MASS_CENTER_Y (pyclesperanto_prototype.STATISTICS_ENTRY attribute) MASS_CENTER_Z (pyclesperanto_prototype.STATISTICS_ENTRY attribute) MAX_DISTANCE_TO_CENTROID (pyclesperanto_prototype.STATISTICS_ENTRY attribute) MAX_DISTANCE_TO_MASS_CENTER (pyclesperanto_prototype.STATISTICS_ENTRY attribute) MAX_MEAN_DISTANCE_TO_CENTROID_RATIO (pyclesperanto_prototype.STATISTICS_ENTRY attribute) MAX_MEAN_DISTANCE_TO_MASS_CENTER_RATIO (pyclesperanto_prototype.STATISTICS_ENTRY attribute) maximum() (in module pyclesperanto_prototype), [1] maximum_box() (in module pyclesperanto_prototype), [1] maximum_distance_of_n_closest_points() (in module pyclesperanto_prototype), [1] maximum_distance_of_n_shortest_distances() (in module pyclesperanto_prototype), [1] maximum_distance_of_touching_neighbors() (in module pyclesperanto_prototype), [1] maximum_extension_map() (in module pyclesperanto_prototype), [1] maximum_image_and_scalar() (in module pyclesperanto_prototype), [1] maximum_images() (in module pyclesperanto_prototype), [1] MAXIMUM_INTENSITY (pyclesperanto_prototype.STATISTICS_ENTRY attribute) maximum_intensity_map() (in module pyclesperanto_prototype), [1] maximum_of_all_pixels() (in module pyclesperanto_prototype), [1] maximum_of_distal_neighbors_map() (in module pyclesperanto_prototype), [1] maximum_of_n_most_touching_neighbors_map() (in module pyclesperanto_prototype), [1] maximum_of_n_nearest_neighbors_map() (in module pyclesperanto_prototype), [1] maximum_of_proximal_neighbors_map() (in module pyclesperanto_prototype), [1] maximum_of_touch_portion_within_range_neighbors_map() (in module pyclesperanto_prototype), [1] maximum_of_touching_neighbors() (in module pyclesperanto_prototype), [1] maximum_of_touching_neighbors_map() (in module pyclesperanto_prototype), [1] maximum_sphere() (in module pyclesperanto_prototype), [1] maximum_x_projection() (in module pyclesperanto_prototype), [1] maximum_y_projection() (in module pyclesperanto_prototype), [1] maximum_z_projection() (in module pyclesperanto_prototype), [1] mean_box() (in module pyclesperanto_prototype), [1] MEAN_DISTANCE_TO_CENTROID (pyclesperanto_prototype.STATISTICS_ENTRY attribute) MEAN_DISTANCE_TO_MASS_CENTER (pyclesperanto_prototype.STATISTICS_ENTRY attribute) mean_extension_map() (in module pyclesperanto_prototype), [1] MEAN_INTENSITY (pyclesperanto_prototype.STATISTICS_ENTRY attribute) mean_intensity_map() (in module pyclesperanto_prototype), [1] mean_of_all_pixels() (in module pyclesperanto_prototype), [1] mean_of_distal_neighbors_map() (in module pyclesperanto_prototype), [1] mean_of_n_most_touching_neighbors_map() (in module pyclesperanto_prototype), [1] mean_of_n_nearest_neighbors_map() (in module pyclesperanto_prototype), [1] mean_of_proximal_neighbors_map() (in module pyclesperanto_prototype), [1] mean_of_touch_portion_within_range_neighbors_map() (in module pyclesperanto_prototype), [1] mean_of_touching_neighbors() (in module pyclesperanto_prototype), [1]

mean_of_touching_neighbors_map() (in module pyclesperanto_prototype), [1] mean_sphere() (in module pyclesperanto_prototype), [1] mean_squared_error() (in module pyclesperanto_prototype), [1] mean_x_projection() (in module pyclesperanto_prototype), [1] mean_y_projection() (in module pyclesperanto_prototype), [1] mean_z_projection() (in module pyclesperanto_prototype), [1] median_box() (in module pyclesperanto_prototype), [1] median_of_touching_neighbors() (in module pyclesperanto_prototype), [1] median_sphere() (in module pyclesperanto_prototype), [1] merge_labels_according_to_touch_matrix() (in module pyclesperanto_prototype), [1] merge_labels_with_border_intensity_within_range() (in module pyclesperanto_prototype), [1] merge_touching_labels() (in module pyclesperanto_prototype), [1] minimum() (in module pyclesperanto_prototype), [1] minimum_box() (in module pyclesperanto_prototype), [1] minimum_distance_of_touching_neighbors() (in module pyclesperanto_prototype), [1] minimum_image_and_scalar() (in module pyclesperanto_prototype), [1] minimum_images() (in module pyclesperanto_prototype), [1] MINIMUM_INTENSITY (pyclesperanto_prototype.STATISTICS_ENTRY attribute) minimum_intensity_map() (in module pyclesperanto_prototype), [1] minimum_of_all_pixels() (in module pyclesperanto_prototype), [1] minimum_of_distal_neighbors_map() (in module pyclesperanto_prototype), [1] minimum_of_masked_pixels() (in module pyclesperanto_prototype), [1] minimum_of_n_most_touching_neighbors_map() (in module pyclesperanto_prototype), [1] minimum_of_n_nearest_neighbors_map() (in module pyclesperanto_prototype), [1] minimum_of_proximal_neighbors_map() (in module pyclesperanto_prototype), [1] minimum_of_touch_portion_within_range_neighbors_map() (in module pyclesperanto_prototype), [1] minimum_of_touching_neighbors() (in module pyclesperanto_prototype), [1] minimum_of_touching_neighbors_map() (in module pyclesperanto_prototype), [1] minimum_sphere() (in module pyclesperanto_prototype), [1] minimum_x_projection() (in module pyclesperanto_prototype), [1] minimum_y_projection() (in module pyclesperanto_prototype), [1] minimum_z_projection() (in module pyclesperanto_prototype), [1] mod() (in module pyclesperanto_prototype), [1] mode_of_distal_neighbors_map() (in module pyclesperanto_prototype), [1] mode_of_n_most_touching_neighbors_map() (in module pyclesperanto_prototype), [1] mode_of_n_nearest_neighbors_map() (in module pyclesperanto_prototype), [1] mode_of_proximal_neighbors_map() (in module pyclesperanto_prototype), [1] mode_of_touch_portion_within_range_neighbors_map() (in module pyclesperanto_prototype), [1] mode_of_touching_neighbors() (in module pyclesperanto_prototype), [1] mode_of_touching_neighbors_map() (in module pyclesperanto_prototype), [1] module pyclesperanto_prototype, [1] modulo_images() (in module pyclesperanto_prototype), [1] multiply_image_and_coordinate() (in module pyclesperanto_prototype), [1] multiply_image_and_scalar() (in module pyclesperanto_prototype), [1] multiply_images() (in module pyclesperanto_prototype), [1] multiply_matrix() (in module pyclesperanto_prototype), [1]

N

n_closest_points() (in module pyclesperanto_prototype), [1] n_nearest_labels_to_igraph() (in module pyclesperanto_prototype), [1] n_nearest_labels_to_networkx() (in module pyclesperanto_prototype), [1] nan_to_num() (in module pyclesperanto_prototype), [1] neighbors_of_neighbors() (in module pyclesperanto_prototype), [1] nonzero_maximum_box() (in module pyclesperanto_prototype), [1]

nonzero_maximum_diamond() (in module pyclesperanto_prototype), [1] nonzero_minimum_box() (in module pyclesperanto_prototype), [1] nonzero_minimum_diamond() (in module pyclesperanto_prototype), [1] not_equal() (in module pyclesperanto_prototype), [1] not_equal_constant() (in module pyclesperanto_prototype), [1] nparray() (in module pyclesperanto_prototype), [1] NUMBER_OF_ENTRIES (pyclesperanto_prototype.STATISTICS_ENTRY attribute)

O

onlyzero_overwrite_maximum_box() (in module pyclesperanto_prototype), [1] onlyzero_overwrite_maximum_diamond() (in module pyclesperanto_prototype), [1] opening_box() (in module pyclesperanto_prototype), [1]

opening_labels() (in module pyclesperanto_prototype), [1] opening_sphere() (in module pyclesperanto_prototype), [1] operation() (in module pyclesperanto_prototype), [1] operations() (in module pyclesperanto_prototype), [1]

P

paste() (in module pyclesperanto_prototype), [1] PIXEL_COUNT (pyclesperanto_prototype.STATISTICS_ENTRY attribute) pixel_count_map() (in module pyclesperanto_prototype), [1] plugin_function() (in module pyclesperanto_prototype), [1] point_index_list_to_mesh() (in module pyclesperanto_prototype), [1] point_index_list_to_touch_matrix() (in module pyclesperanto_prototype), [1] pointlist_to_labelled_spots() (in module pyclesperanto_prototype), [1] power() (in module pyclesperanto_prototype), [1] power_images() (in module pyclesperanto_prototype), [1] prefix_in_x() (in module pyclesperanto_prototype), [1] proximal_labels_to_igraph() (in module pyclesperanto_prototype), [1] proximal_labels_to_networkx() (in module pyclesperanto_prototype), [1]

proximal_neighbor_count() (in module pyclesperanto_prototype), [1] proximal_neighbor_count_map() (in module pyclesperanto_prototype), [1] proximal_other_labels_count() (in module pyclesperanto_prototype), [1] proximal_other_labels_count_map() (in module pyclesperanto_prototype), [1] pull() (in module pyclesperanto_prototype), [1] pull_zyx() (in module pyclesperanto_prototype) push() (in module pyclesperanto_prototype), [1] push_regionprops() (in module pyclesperanto_prototype), [1] push_regionprops_column() (in module pyclesperanto_prototype) push_zyx() (in module pyclesperanto_prototype) pyclesperanto_prototype module, [1]

R

radians_to_degrees() (in module pyclesperanto_prototype), [1] radius_to_kernel_size() (in module pyclesperanto_prototype) range() (in module pyclesperanto_prototype), [1] read_intensities_from_map() (in module pyclesperanto_prototype), [1] read_intensities_from_positions() (in module pyclesperanto_prototype), [1] reciprocal() (in module pyclesperanto_prototype), [1] reduce_labels_to_centroids() (in module pyclesperanto_prototype), [1] reduce_labels_to_label_edges() (in module pyclesperanto_prototype), [1] reduce_stack() (in module pyclesperanto_prototype), [1] regionprops() (in module pyclesperanto_prototype), [1]

relabel_sequential() (in module pyclesperanto_prototype), [1] remainder() (in module pyclesperanto_prototype), [1] replace_intensities() (in module pyclesperanto_prototype), [1] replace_intensity() (in module pyclesperanto_prototype), [1] resample() (in module pyclesperanto_prototype), [1] rigid_transform() (in module pyclesperanto_prototype), [1] rotate() (in module pyclesperanto_prototype), [1] (pyclesperanto_prototype.AffineTransform3D method), [1] rotate_around_x_axis() (pyclesperanto_prototype.AffineTransform3D method), [1] rotate_around_y_axis() (pyclesperanto_prototype.AffineTransform3D method), [1] rotate_around_z_axis() (pyclesperanto_prototype.AffineTransform3D method), [1]

S

scale() (in module pyclesperanto_prototype), [1] (pyclesperanto_prototype.AffineTransform3D method), [1] search_operation_names() (in module pyclesperanto_prototype) select_device() (in module pyclesperanto_prototype), [1] set() (in module pyclesperanto_prototype), [1] (pyclesperanto_prototype.Backend method) set_column() (in module pyclesperanto_prototype), [1] set_device_scoring_key() (in module pyclesperanto_prototype) set_image_borders() (in module pyclesperanto_prototype), [1] set_non_zero_pixels_to_pixel_index() (in module pyclesperanto_prototype), [1] set_nonzero_pixels_to_pixelindex() (in module pyclesperanto_prototype), [1] set_plane() (in module pyclesperanto_prototype), [1] set_ramp_x() (in module pyclesperanto_prototype), [1] set_ramp_y() (in module pyclesperanto_prototype), [1] set_ramp_z() (in module pyclesperanto_prototype), [1] set_row() (in module pyclesperanto_prototype), [1] set_wait_for_kernel_finish() (in module pyclesperanto_prototype) set_where_x_equals_y() (in module pyclesperanto_prototype), [1] set_where_x_greater_than_y() (in module pyclesperanto_prototype), [1] set_where_x_smaller_than_y() (in module pyclesperanto_prototype), [1] shear_in_x_plane() (pyclesperanto_prototype.AffineTransform3D method), [1] shear_in_y_plane() (pyclesperanto_prototype.AffineTransform3D method), [1] shear_in_z_plane() (pyclesperanto_prototype.AffineTransform3D method), [1] sigma_to_kernel_size() (in module pyclesperanto_prototype) sign() (in module pyclesperanto_prototype), [1] small_hessian_eigenvalue() (in module pyclesperanto_prototype), [1] smaller() (in module pyclesperanto_prototype), [1] smaller_constant() (in module pyclesperanto_prototype), [1] smaller_or_equal() (in module pyclesperanto_prototype), [1] smaller_or_equal_constant() (in module pyclesperanto_prototype), [1] smooth_labels() (in module pyclesperanto_prototype), [1] sobel() (in module pyclesperanto_prototype), [1] sorensen_dice_coefficient() (in module pyclesperanto_prototype), [1] spots_to_pointlist() (in module pyclesperanto_prototype), [1] sqrt() (in module pyclesperanto_prototype), [1] square() (in module pyclesperanto_prototype), [1] square_root() (in module pyclesperanto_prototype), [1] squared_difference() (in module pyclesperanto_prototype), [1] standard_deviation_box() (in module pyclesperanto_prototype), [1] STANDARD_DEVIATION_INTENSITY (pyclesperanto_prototype.STATISTICS_ENTRY attribute)

standard_deviation_intensity_map() (in module pyclesperanto_prototype), [1] standard_deviation_of_distal_neighbors_map() (in module pyclesperanto_prototype), [1] standard_deviation_of_n_most_touching_neighbors_map() (in module pyclesperanto_prototype), [1] standard_deviation_of_n_nearest_neighbors_map() (in module pyclesperanto_prototype), [1] standard_deviation_of_proximal_neighbors_map() (in module pyclesperanto_prototype), [1] standard_deviation_of_touch_portion_within_range_neighbors_map() (in module pyclesperanto_prototype), [1] standard_deviation_of_touching_neighbors() (in module pyclesperanto_prototype), [1] standard_deviation_of_touching_neighbors_map() (in module pyclesperanto_prototype), [1] standard_deviation_sphere() (in module pyclesperanto_prototype), [1] standard_deviation_touch_portion() (in module pyclesperanto_prototype), [1] standard_deviation_touch_portion_map() (in module pyclesperanto_prototype), [1] standard_deviation_z_projection() (in module pyclesperanto_prototype), [1] STATISTICS_ENTRY (class in pyclesperanto_prototype), [1] statistics_of_background_and_labelled_pixels() (in module pyclesperanto_prototype), [1] statistics_of_image() (in module pyclesperanto_prototype), [1] statistics_of_labelled_neighbors() (in module pyclesperanto_prototype), [1] statistics_of_labelled_pixels() (in module pyclesperanto_prototype), [1] sub_stack() (in module pyclesperanto_prototype), [1] subtract_gaussian_background() (in module pyclesperanto_prototype), [1] subtract_image_from_scalar() (in module pyclesperanto_prototype), [1] subtract_images() (in module pyclesperanto_prototype), [1] subtract_labels() (in module pyclesperanto_prototype), [1] SUM_DISTANCE_TO_CENTROID (pyclesperanto_prototype.STATISTICS_ENTRY attribute) SUM_DISTANCE_TO_MASS_CENTER (pyclesperanto_prototype.STATISTICS_ENTRY attribute) SUM_INTENSITY (pyclesperanto_prototype.STATISTICS_ENTRY attribute) SUM_INTENSITY_TIMES_X (pyclesperanto_prototype.STATISTICS_ENTRY attribute) SUM_INTENSITY_TIMES_Y (pyclesperanto_prototype.STATISTICS_ENTRY attribute) SUM_INTENSITY_TIMES_Z (pyclesperanto_prototype.STATISTICS_ENTRY attribute) sum_of_all_pixels() (in module pyclesperanto_prototype), [1] sum_reduction_x() (in module pyclesperanto_prototype), [1] SUM_X (pyclesperanto_prototype.STATISTICS_ENTRY attribute) sum_x_projection() (in module pyclesperanto_prototype), [1] SUM_Y (pyclesperanto_prototype.STATISTICS_ENTRY attribute) sum_y_projection() (in module pyclesperanto_prototype), [1] SUM_Z (pyclesperanto_prototype.STATISTICS_ENTRY attribute) sum_z_projection() (in module pyclesperanto_prototype), [1] symmetric_maximum_matrix() (in module pyclesperanto_prototype), [1] symmetric_mean_matrix() (in module pyclesperanto_prototype), [1] symmetric_minimum_matrix() (in module pyclesperanto_prototype), [1] symmetric_sum_matrix() (in module pyclesperanto_prototype), [1]

T

threshold() (in module pyclesperanto_prototype), [1] threshold_otsu() (in module pyclesperanto_prototype), [1] to_igraph() (in module pyclesperanto_prototype), [1] to_networkx() (in module pyclesperanto_prototype), [1] top_hat_box() (in module pyclesperanto_prototype), [1] top_hat_sphere() (in module pyclesperanto_prototype), [1] touch_matrix_to_adjacency_matrix() (in module pyclesperanto_prototype), [1] touch_matrix_to_mesh() (in module pyclesperanto_prototype), [1] touch_portion_within_range_neighbor_count() (in module pyclesperanto_prototype), [1]

touch_portion_within_range_neighbor_count_map() (in module pyclesperanto_prototype), [1] touching_labels_to_igraph() (in module pyclesperanto_prototype), [1] touching_labels_to_networkx() (in module pyclesperanto_prototype), [1] touching_neighbor_count_map() (in module pyclesperanto_prototype), [1] translate() (in module pyclesperanto_prototype), [1] (pyclesperanto_prototype.AffineTransform3D method), [1] transpose_xy() (in module pyclesperanto_prototype), [1] transpose_xz() (in module pyclesperanto_prototype), [1] transpose_yz() (in module pyclesperanto_prototype), [1]

U

undefined_to_zero() (in module pyclesperanto_prototype), [1]

V

variance_box() (in module pyclesperanto_prototype), [1] variance_sphere() (in module pyclesperanto_prototype), [1]

voronoi_labeling() (in module pyclesperanto_prototype), [1] voronoi_otsu_labeling() (in module pyclesperanto_prototype), [1]

W

write_values_to_positions() (in module pyclesperanto_prototype), [1]

Z

z_position_of_maximum_z_projection() (in module pyclesperanto_prototype), [1] z_position_of_minimum_z_projection() (in module pyclesperanto_prototype), [1]

z_position_projection() (in module pyclesperanto_prototype), [1] z_position_range_projection() (in module pyclesperanto_prototype), [1]